RNAi – Preci­sion pest control with a promising future?

RNA-based insec­ti­cides appear to be promising. They are precise, they protect bene­fi­cial organ­isms, and they can be produced cost-effec­tively. The method brings new poten­tial to crop protec­tion, espe­cially where tradi­tional active ingre­di­ents are lacking.

It is a common mech­a­nism in nature: When living organ­isms are confronted with a virus, many recog­nise its RNA – the genetic mate­rial which allows viral proteins to be produced – and block it from working in the host cell. This reac­tion (RNA inter­fer­ence, RNAi for short) was first used in the labo­ra­tory in 1998. Researchers switched off specific genes in nema­todes using synthet­i­cally produced double-stranded RNA derived from the worms’ own genetic mate­rial. The scien­tists were awarded a Nobel Prize in Medi­cine for this proce­dure.

First field trials in Europe

In light of dwin­dling chem­ical options, RNAi is increas­ingly becoming a focal point in crop protec­tion. “Following the neon­i­coti­noid ban, there is no longer any alter­na­tive to combating aphids respon­sible for trans­mit­ting yellowing viruses,” says Professor Andreas Vilcin­skas, insect researcher at the Fraun­hofer Insti­tute for Biore­sources in Giessen, Germany.

In recent years, emer­gency autho­ri­sa­tions for neon­i­coti­noids have been increasing in Germany. To reduce future reliance on emer­gency measures, the Vive­Beet project was launched at the Fraun­hofer Insti­tute. The aim was to develop an RNAi spray to combat aphids in sugar beet. “We are contributing our exper­tise in insect genetics,” explains Andreas. “A formu­la­tion has already been devel­oped, and a patent has been applied for.” The Julius Kühn Insti­tute and the Insti­tute for Sugar Beet Research are also involved in Vive­Beet, which began initial field trials in 2024, with encour­aging results.

How do RNAi insec­ti­cides work?

An organism’s DNA – its genetic blue­print – is copied in cells as messenger RNA (mRNA), which is the template for produc­tion of vital proteins. This mRNA is normally single-stranded and the ribo­somes read it to produce proteins. However, if the cell encoun­ters double-stranded RNA – typical of viruses – it recog­nises an anomaly. Specialised enzymes cut the RNA into small frag­ments that bind to the corre­sponding, sequence-iden­tical mRNA and block its trans­la­tion. Researchers use precisely this mech­a­nism to silence the genes of the target insect.

Less than 10g per hectare

Aphids, cicadas, beetles – there is no shortage of target organ­isms. The first step is to use bioin­for­matic methods to iden­tify which genes, when silenced, lead to the death or ster­il­i­sa­tion of an insect. The effects of different doses of double-stranded RNA (dsRNA) are then tested by microin­jec­tion or inges­tion.

In the past, work at the Fraun­hofer Insti­tute has contributed to the devel­op­ment of the first RNAi spray for combating the Colorado potato beetle. This was approved in the US in 2023. Manu­fac­turer Green­light Bioscience states that it achieves an effect compa­rable to that of conven­tional insec­ti­cides at an appli­ca­tion rate of just 9.9g/ha. It is applied in the same way as a conven­tional spray, and the company says leaf loss remained below 10% in field trials in 2020.

In the United States, Colorado potato beetles have already been success­fully combated using RNA spray. First appli­ca­tions for approval of this new crop protec­tion product have been submitted in the EU.

A barrier against resis­tance

One of the strengths of the tech­nology is that resis­tance to dsRNA can be largely avoided. “The advan­tage over normal chem­ical pesti­cides is the possi­bility of combining active ingre­di­ents,” explains Professor Karl-Heinz Kogel from the Insti­tute of Phytopathology at JLU Giessen. He is one of the pioneers of using RNAi in crop protec­tion. “As a rule, we don’t just target a single gene, but five to 10. Of course, you can never completely rule out the possi­bility of resis­tance devel­oping, but the prob­a­bility of several muta­tions occur­ring simul­ta­ne­ously is extremely low.”

High selec­tivity

Another benefit of these substances lies in their high speci­ficity. As Karl-Heinz empha­sises, the mole­cules are theo­ret­i­cally harm­less to non-target organ­isms, provided that their genetic mate­rial has been care­fully matched along­side mortality tests. Never­the­less, the method raises concerns among envi­ron­men­tal­ists, espe­cially as the public often asso­ciate it with genetic engi­neering. “But these are not GMOs, as no genetic mate­rial is altered in the target organism,” empha­sises Andreas.

They are not GMOs, as no genetic mate­rial is altered in the target organism.

Prof. Andreas Vilcin­skas

Compre­hen­sive studies on ecolog­ical safety are still lacking. However, initial research on polli­na­tors or closely related insect species, for example, shows no nega­tive effects. Although the entire diver­sity of a field ecosystem cannot be tested for genetic simi­lar­i­ties, these selec­tive mole­cules open up new avenues for more targeted control that poten­tially conserves biodi­ver­sity.

In addi­tion, it could become a weapon against the main enemy of the bee – the Varroa mite. “RNAi is an inno­v­a­tive strategy for combating certain arthro­pods while at the same time protecting bees and the envi­ron­ment,” says Dr Delphine Goven from the Univer­sity of Angers in France. As part of the ParaGluR­Site project, she is working on iden­ti­fying proteins to develop dsRNA mole­cules that target the Varroa’s vital genes, as well as other arthro­pods like ticks and aphids.

Reduced produc­tion costs

The same applies to the risk to human health: “In prin­ciple, dsRNAs are not harmful to the envi­ron­ment, as RNA mole­cules are very unstable and rapidly biodegrad­able,” says Karl-Heinz. The Minnesota Depart­ment of Agri­cul­ture deter­mined a half-life in water of one to two days for a mole­cule marketed in the US – almost a hundred times shorter than that of some chem­ical agents.

In prin­ciple, dsRNAs are not harmful to the envi­ron­ment, as RNA mole­cules are very unstable and rapidly biodegrad­able.

Prof. Karl-Heinz Kogel

However, it is precisely this insta­bility that poses a chal­lenge in field appli­ca­tions. In order for RNA to remain effec­tive for the required time, it must be protected –from UV radi­a­tion, mois­ture, or the diges­tive enzymes of insects. This usually requires encap­su­la­tion in nanopar­ti­cles or embed­ding in polymer complexes. The high tech­nical complexity – combined with regu­la­tory uncer­tain­ties and ques­tions about the envi­ron­mental impact of these RNA complexes – is currently slowing down invest­ment in Europe.

And yet, the Colorado potato beetle spray, Calantha, demon­strates that the approach can be viable – at a price of around one dollar per gram. For compar­ison, just 15 years ago, the price of RNAi in labo­ra­to­ries was over 12,000 dollars per gram. “RNA research in Europe is on the upswing, with numerous projects and appli­ca­tions for autho­ri­sa­tion,” says Andreas. Much will depend on the polit­ical will – but the need is unde­ni­able: “The farmers I speak to feel disarmed because they have fewer and fewer crop protec­tion prod­ucts at their disposal”.

More than just insec­ti­cides?

In prin­ciple, RNAi tech­nology is effec­tive against almost all types of pathogens or pests in the labo­ra­tory. “The ques­tion is: How do you get the substance to where it is supposed to work?” explains Karl-Heinz Kogel. “Double-stranded RNA could also be an excel­lent herbi­cide – provided we can find a tech­nology to reli­ably intro­duce it into the plant.”

Brachy­podium distachyon (purple false brome) infected with Magna­porthe oryzae (rice blast fungus). Well-devel­oped disease-free grasses (right) after treat­ment with formu­lated dsRNA. Left: Control plants without dsRNA and in the middle, plants treated with dsRNA (without formu­la­tion).

At Justus Liebig Univer­sity in Giessen, for example, researchers are testing high-pres­sure sprayers that create micro­scop­i­cally small lesions on the leaf surface, allowing the RNA mole­cules to enter. A compa­rable process would also be inter­esting for combating viruses – an area in which RNAi is partic­u­larly promising, as it imitates precisely this natural immune response.

“With regard to bacteria, we don’t know enough about the mech­a­nism of gene silencing here yet,” says Karl-Heinz. “The poten­tial with fungi is much greater – we’ve already had good success in the labo­ra­tory here.” However, the tech­nique remains most effec­tive in insects, as at least some insect groups ingest RNA through their food and have special proteins to absorb double-stranded RNA in the gut.